Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 RNF216P1-203ENST00000404404 2427 ntBASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 TUBB7P-202ENST00000428444 1305 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 KRT8P49-201ENST00000604166 1432 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 AC011270.2-201ENST00000624293 2550 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 AL021920.2-201ENST00000624828 1351 ntBASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CUEDC1Q9NWM3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 IGLL3P-201ENST00000412472 434 ntBASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 RPS8P6-201ENST00000426177 609 ntBASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 AC007967.2-201ENST00000432613 625 ntBASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 PRSS29P-201ENST00000440800 595 ntBASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 VN2R19P-201ENST00000442399 1052 ntBASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
CUEDC1Q9NWM3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CUEDC1Q9NWM3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms