Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 AC012569.1-201ENST00000591191 1524 ntBASIC17.97■□□□□ 0.47
CISHQ9NSE2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 AL671710.1-201ENST00000610245 2349 ntBASIC17.97■□□□□ 0.47
CISHQ9NSE2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 SNX33P1-201ENST00000592116 1762 ntBASIC17.96■□□□□ 0.47
CISHQ9NSE2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 MIR574-201ENST00000385209 96 ntBASIC17.96■□□□□ 0.47
CISHQ9NSE2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 RNA5SP416-201ENST00000516838 111 ntBASIC17.96■□□□□ 0.47
CISHQ9NSE2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.96■□□□□ 0.47
CISHQ9NSE2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 AC092171.3-201ENST00000610122 2651 ntBASIC17.96■□□□□ 0.47
CISHQ9NSE2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
CISHQ9NSE2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CISHQ9NSE2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.96■□□□□ 0.46
CISHQ9NSE2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CISHQ9NSE2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CISHQ9NSE2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 UBALD1-205ENST00000590891 2641 ntBASIC17.95■□□□□ 0.46
CISHQ9NSE2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 AC004877.2-201ENST00000623941 599 ntBASIC17.95■□□□□ 0.46
CISHQ9NSE2 AP001350.2-201ENST00000625104 1094 ntBASIC17.95■□□□□ 0.46
CISHQ9NSE2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 AL139011.1-202ENST00000642063 584 ntBASIC17.95■□□□□ 0.46
CISHQ9NSE2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.95■□□□□ 0.46
CISHQ9NSE2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CISHQ9NSE2 HLA-A-202ENST00000376806 1854 ntBASIC17.95■□□□□ 0.46
CISHQ9NSE2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 MIR940-201ENST00000401276 94 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 HMGA1P7-201ENST00000406908 502 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CISHQ9NSE2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 AL671883.3-201ENST00000603274 991 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 AC023141.13-201ENST00000604991 943 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 AC007064.4-201ENST00000637740 555 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.94■□□□□ 0.46
CISHQ9NSE2 AL645728.2-201ENST00000641974 660 ntBASIC17.94■□□□□ 0.46
CISHQ9NSE2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms