Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.289e-8■□□□□ 11
CSTF2TQ9H0L4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.294e-6■□□□□ 11
CSTF2TQ9H0L4 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.52□□□□□ -0.414e-6■□□□□ 11
CSTF2TQ9H0L4 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.641e-7■□□□□ 11
CSTF2TQ9H0L4 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC10.87□□□□□ -0.674e-6■□□□□ 11
CSTF2TQ9H0L4 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC10.29□□□□□ -0.769e-8■□□□□ 11
CSTF2TQ9H0L4 CEP72-202ENST00000499639 461 ntTSL 39.6□□□□□ -0.874e-6■□□□□ 11
CSTF2TQ9H0L4 AFDN-204ENST00000366809 4839 ntTSL 1 (best)9.33□□□□□ -0.924e-6■□□□□ 11
CSTF2TQ9H0L4 SOCS2-208ENST00000549510 581 ntTSL 28.24□□□□□ -1.094e-6■□□□□ 11
CSTF2TQ9H0L4 SEPT11-212ENST00000512575 587 ntTSL 46.05□□□□□ -1.444e-6■□□□□ 11
CSTF2TQ9H0L4 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.621e-7■□□□□ 11
CSTF2TQ9H0L4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.147e-9■□□□□ 11
CSTF2TQ9H0L4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.847e-9■□□□□ 11
CSTF2TQ9H0L4 AKT1S1-202ENST00000391830 623 ntTSL 219.98■□□□□ 0.797e-9■□□□□ 11
CSTF2TQ9H0L4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.727e-9■□□□□ 11
CSTF2TQ9H0L4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.357e-9■□□□□ 11
CSTF2TQ9H0L4 PNKP-223ENST00000629179 811 ntTSL 413.3□□□□□ -0.287e-9■□□□□ 11
CSTF2TQ9H0L4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.076e-8■□□□□ 11
CSTF2TQ9H0L4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.223e-6■□□□□ 11
CSTF2TQ9H0L4 ASB1-208ENST00000481566 701 ntTSL 513.76□□□□□ -0.213e-6■□□□□ 11
CSTF2TQ9H0L4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.83■■□□□ 1.081e-6■□□□□ 11
CSTF2TQ9H0L4 IRF3-218ENST00000597369 550 ntTSL 212.47□□□□□ -0.415e-9■□□□□ 11
CSTF2TQ9H0L4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.94□□□□□ -0.024e-6■□□□□ 11
CSTF2TQ9H0L4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.184e-6■□□□□ 11
CSTF2TQ9H0L4 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.444e-6■□□□□ 11
CSTF2TQ9H0L4 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.864e-6■□□□□ 11
CSTF2TQ9H0L4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.527e-8■□□□□ 11
CSTF2TQ9H0L4 RREB1-205ENST00000467782 243 ntTSL 515.13■□□□□ 0.017e-8■□□□□ 11
CSTF2TQ9H0L4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.86□□□□□ -0.197e-8■□□□□ 11
CSTF2TQ9H0L4 CADM1-207ENST00000537140 1646 ntTSL 1 (best)20.05■□□□□ 0.82e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.93■□□□□ 0.782e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-205ENST00000536781 575 ntTSL 417.68■□□□□ 0.422e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-210ENST00000540951 572 ntTSL 317.68■□□□□ 0.422e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-218ENST00000545380 2373 ntTSL 1 (best)15.94■□□□□ 0.142e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-211ENST00000541434 1112 ntTSL 1 (best)14.43□□□□□ -0.12e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.82□□□□□ -0.362e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.28□□□□□ -0.442e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.922e-6■□□□□ 11
CSTF2TQ9H0L4 CADM1-214ENST00000543249 565 ntTSL 45.4□□□□□ -1.542e-6■□□□□ 11
CSTF2TQ9H0L4 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.182e-9■□□□□ 11
CSTF2TQ9H0L4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.652e-7■□□□□ 11
CSTF2TQ9H0L4 RAP2C-204ENST00000490400 215 ntTSL 215.88■□□□□ 0.132e-7■□□□□ 11
CSTF2TQ9H0L4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.012e-7■□□□□ 11
CSTF2TQ9H0L4 RAP2C-203ENST00000460462 804 ntTSL 311.66□□□□□ -0.542e-7■□□□□ 11
CSTF2TQ9H0L4 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC9□□□□□ -0.972e-7■□□□□ 11
CSTF2TQ9H0L4 TMEM135-204ENST00000526733 496 ntTSL 217.23■□□□□ 0.357e-8■□□□□ 10.9
CSTF2TQ9H0L4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.91■□□□□ 0.37e-8■□□□□ 10.9
CSTF2TQ9H0L4 TMEM135-203ENST00000525018 753 ntTSL 58.02□□□□□ -1.137e-8■□□□□ 10.9
CSTF2TQ9H0L4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.69□□□□□ -1.187e-8■□□□□ 10.9
CSTF2TQ9H0L4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.397e-8■□□□□ 10.9
CSTF2TQ9H0L4 TMEM135-206ENST00000529023 1095 ntTSL 26.07□□□□□ -1.447e-8■□□□□ 10.9
CSTF2TQ9H0L4 MICALL2-211ENST00000487156 874 ntTSL 518.18■□□□□ 0.55e-8■□□□□ 10.9
CSTF2TQ9H0L4 PACS2-206ENST00000547903 1157 ntTSL 516.65■□□□□ 0.261e-6■□□□□ 10.9
CSTF2TQ9H0L4 PACS2-212ENST00000551743 1876 ntTSL 516.32■□□□□ 0.21e-6■□□□□ 10.9
CSTF2TQ9H0L4 PACS2-211ENST00000551692 3453 ntTSL 213.27□□□□□ -0.281e-6■□□□□ 10.9
CSTF2TQ9H0L4 MED15-218ENST00000451058 418 ntTSL 317.94■□□□□ 0.461e-7■□□□□ 10.9
CSTF2TQ9H0L4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.376e-10■□□□□ 10.9
CSTF2TQ9H0L4 MED15-221ENST00000473028 556 ntTSL 416.63■□□□□ 0.251e-7■□□□□ 10.9
CSTF2TQ9H0L4 MED15-216ENST00000445189 596 ntTSL 415.57■□□□□ 0.081e-7■□□□□ 10.9
CSTF2TQ9H0L4 ARVCF-205ENST00000462319 433 ntTSL 313.29□□□□□ -0.281e-7■□□□□ 10.9
CSTF2TQ9H0L4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.57e-24■□□□□ 10.9
CSTF2TQ9H0L4 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)17.96■□□□□ 0.477e-24■□□□□ 10.9
CSTF2TQ9H0L4 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 317.89■□□□□ 0.457e-24■□□□□ 10.9
CSTF2TQ9H0L4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.051e-6■□□□□ 10.9
CSTF2TQ9H0L4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.031e-6■□□□□ 10.9
CSTF2TQ9H0L4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.911e-6■□□□□ 10.9
CSTF2TQ9H0L4 MAGI2-216ENST00000628997 641 ntTSL 312.82□□□□□ -0.361e-6■□□□□ 10.9
CSTF2TQ9H0L4 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC9.71□□□□□ -0.861e-6■□□□□ 10.9
CSTF2TQ9H0L4 MAGI2-225ENST00000636234 5702 ntTSL 54.03□□□□□ -1.761e-6■□□□□ 10.9
CSTF2TQ9H0L4 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.862e-12■□□□□ 10.9
CSTF2TQ9H0L4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.081e-7■□□□□ 10.9
CSTF2TQ9H0L4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.512e-10■□□□□ 10.9
CSTF2TQ9H0L4 TKT-204ENST00000450814 1941 ntTSL 215.61■□□□□ 0.091e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-212ENST00000483706 565 ntTSL 214.92□□□□□ -0.021e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.11□□□□□ -0.151e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-211ENST00000472528 1055 ntTSL 1 (best)14.04□□□□□ -0.161e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-210ENST00000469678 1871 ntTSL 513.81□□□□□ -0.21e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.76□□□□□ -0.211e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■□□□□ 10.9
CSTF2TQ9H0L4 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.741e-6■□□□□ 10.9
CSTF2TQ9H0L4 ROR2-205ENST00000495386 664 ntTSL 313.04□□□□□ -0.324e-6■□□□□ 10.9
CSTF2TQ9H0L4 ROR2-206ENST00000546883 501 ntTSL 312.17□□□□□ -0.464e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-222ENST00000497144 598 ntTSL 416.51■□□□□ 0.233e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-204ENST00000416579 895 ntTSL 313.95□□□□□ -0.183e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-206ENST00000450185 2975 ntTSL 211.16□□□□□ -0.623e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-205ENST00000442582 489 ntTSL 310.08□□□□□ -0.83e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-218ENST00000487508 507 ntTSL 410.06□□□□□ -0.83e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-208ENST00000463277 575 ntTSL 49.63□□□□□ -0.873e-6■□□□□ 10.9
CSTF2TQ9H0L4 SFXN5-209ENST00000464825 532 ntTSL 47.71□□□□□ -1.183e-6■□□□□ 10.9
CSTF2TQ9H0L4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.732e-8■□□□□ 10.9
CSTF2TQ9H0L4 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)13.45□□□□□ -0.266e-7■□□□□ 10.9
CSTF2TQ9H0L4 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.46e-7■□□□□ 10.9
CSTF2TQ9H0L4 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.56□□□□□ -0.46e-7■□□□□ 10.9
CSTF2TQ9H0L4 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC10.96□□□□□ -0.656e-7■□□□□ 10.9
CSTF2TQ9H0L4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.083e-7■□□□□ 10.9
CSTF2TQ9H0L4 ZNF337-203ENST00000481610 572 ntTSL 37.65□□□□□ -1.182e-8■□□□□ 10.9
CSTF2TQ9H0L4 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.232e-8■□□□□ 10.9
CSTF2TQ9H0L4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.484e-7■□□□□ 10.9
CSTF2TQ9H0L4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.362e-8■□□□□ 10.9
Retrieved 100 of 19,151 protein–RNA pairs in 176.4 ms