Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AP001094.4-201ENST00000579008 2176 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC02012-201ENST00000608206 1725 ntBASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP4-3Q9BYR4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 HNRNPFP1-201ENST00000391730 1133 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE11-202ENST00000450699 704 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 UGT1A2P-201ENST00000454886 866 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE9P-201ENST00000570642 692 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AL009183.1-201ENST00000603760 355 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC004835.2-201ENST00000603762 682 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC026120.1-201ENST00000611536 926 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE10P-202ENST00000612005 668 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE8P-202ENST00000612377 668 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP4-3Q9BYR4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms