Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 SLC25A1P3-201ENST00000395415 828 ntBASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 AC114341.1-201ENST00000618070 349 ntBASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CHRDL1Q9BU40 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC103702.1-201ENST00000548801 2630 ntBASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC009336.1-201ENST00000608941 1553 ntBASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC003669.1-201ENST00000334569 611 ntBASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 UPK3BP1-201ENST00000428678 509 ntBASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 AC073592.5-201ENST00000624854 528 ntBASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHRDL1Q9BU40 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 AC060834.1-201ENST00000443027 2032 ntBASIC13.46□□□□□ -0.26
CHRDL1Q9BU40 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms