Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
USB1Q9BQ65 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
USB1Q9BQ65 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
USB1Q9BQ65 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.17■□□□□ 0.02
USB1Q9BQ65 AC012317.2-201ENST00000623305 2251 ntBASIC15.17■□□□□ 0.02
USB1Q9BQ65 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.17■□□□□ 0.02
USB1Q9BQ65 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AC004817.3-201ENST00000602957 2129 ntBASIC15.16■□□□□ 0.02
USB1Q9BQ65 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AP002414.3-201ENST00000589352 1468 ntBASIC15.16■□□□□ 0.02
USB1Q9BQ65 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 MED15P5-201ENST00000423150 992 ntBASIC15.16■□□□□ 0.02
USB1Q9BQ65 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AD000864.1-201ENST00000624076 2295 ntBASIC15.16■□□□□ 0.02
USB1Q9BQ65 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AC148477.5-201ENST00000625164 1645 ntBASIC15.16■□□□□ 0.02
USB1Q9BQ65 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
USB1Q9BQ65 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
USB1Q9BQ65 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 AC046185.3-201ENST00000623228 1824 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 LINC00982-205ENST00000420957 435 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 SEC63P1-201ENST00000425785 1258 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 AC009947.1-201ENST00000444350 727 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 KRT18P3-201ENST00000451602 1288 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 AC108751.1-201ENST00000490852 363 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 RPS15P9-201ENST00000494093 319 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 IGHV3-65-201ENST00000523210 341 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 AC040169.1-201ENST00000565382 521 ntBASIC15.15■□□□□ 0.02
USB1Q9BQ65 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
USB1Q9BQ65 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.15■□□□□ 0.02
USB1Q9BQ65 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USB1Q9BQ65 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.14■□□□□ 0.01
USB1Q9BQ65 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USB1Q9BQ65 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
USB1Q9BQ65 HYMAI-201ENST00000635591 3347 ntBASIC15.14■□□□□ 0.01
USB1Q9BQ65 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USB1Q9BQ65 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USB1Q9BQ65 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms