Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL161645.1-201ENST00000622716 1255 ntBASIC17.62■□□□□ 0.41
SMOQ99835 AC105339.1-204ENST00000636249 355 ntBASIC17.62■□□□□ 0.41
SMOQ99835 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMOQ99835 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.62■□□□□ 0.41
SMOQ99835 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMOQ99835 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.62■□□□□ 0.41
SMOQ99835 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.62■□□□□ 0.41
SMOQ99835 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SMOQ99835 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SMOQ99835 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMOQ99835 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SMOQ99835 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.61■□□□□ 0.41
SMOQ99835 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SMOQ99835 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.61■□□□□ 0.41
SMOQ99835 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.61■□□□□ 0.41
SMOQ99835 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.61■□□□□ 0.41
SMOQ99835 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.61■□□□□ 0.41
SMOQ99835 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.61■□□□□ 0.41
SMOQ99835 KRT8P48-201ENST00000515599 1220 ntBASIC17.61■□□□□ 0.41
SMOQ99835 RARRES2P8-201ENST00000566335 367 ntBASIC17.61■□□□□ 0.41
SMOQ99835 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.61■□□□□ 0.41
SMOQ99835 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.61■□□□□ 0.41
SMOQ99835 AL513210.1-201ENST00000629608 234 ntBASIC17.61■□□□□ 0.41
SMOQ99835 AL139011.1-202ENST00000642063 584 ntBASIC17.61■□□□□ 0.41
SMOQ99835 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.61■□□□□ 0.41
SMOQ99835 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMOQ99835 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMOQ99835 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
SMOQ99835 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 TFAMP1-201ENST00000412727 736 ntBASIC17.6■□□□□ 0.41
SMOQ99835 AC254562.1-201ENST00000417586 456 ntBASIC17.6■□□□□ 0.41
SMOQ99835 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.6■□□□□ 0.41
SMOQ99835 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 AC022145.2-201ENST00000598203 171 ntBASIC17.6■□□□□ 0.41
SMOQ99835 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.6■□□□□ 0.41
SMOQ99835 AC026120.1-201ENST00000611536 926 ntBASIC17.6■□□□□ 0.41
SMOQ99835 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.6■□□□□ 0.41
SMOQ99835 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMOQ99835 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.6■□□□□ 0.41
SMOQ99835 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.6■□□□□ 0.41
SMOQ99835 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.6■□□□□ 0.41
SMOQ99835 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SMOQ99835 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
SMOQ99835 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMOQ99835 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMOQ99835 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.6■□□□□ 0.41
SMOQ99835 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms