Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.23□□□□□ -0.61
LITAFQ99732 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
LITAFQ99732 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 AL049757.1-201ENST00000616842 1596 ntBASIC11.23□□□□□ -0.61
LITAFQ99732 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.23□□□□□ -0.61
LITAFQ99732 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 AC069224.1-201ENST00000566372 1715 ntBASIC11.23□□□□□ -0.61
LITAFQ99732 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 AC007292.2-201ENST00000593524 1812 ntBASIC11.23□□□□□ -0.61
LITAFQ99732 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 AL359258.3-201ENST00000622910 2331 ntBASIC11.23□□□□□ -0.61
LITAFQ99732 AC136621.1-201ENST00000624017 2304 ntBASIC11.23□□□□□ -0.61
LITAFQ99732 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LITAFQ99732 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 ESRRAP1-201ENST00000400596 1257 ntBASIC11.22□□□□□ -0.61
LITAFQ99732 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.22□□□□□ -0.61
LITAFQ99732 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.22□□□□□ -0.61
LITAFQ99732 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 C1QBPP2-201ENST00000528754 825 ntBASIC11.22□□□□□ -0.61
LITAFQ99732 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.22□□□□□ -0.61
LITAFQ99732 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.22□□□□□ -0.61
LITAFQ99732 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 AC106881.1-201ENST00000605849 3329 ntBASIC11.22□□□□□ -0.61
LITAFQ99732 AC005089.1-201ENST00000619486 2241 ntBASIC11.22□□□□□ -0.61
LITAFQ99732 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 AC116562.4-202ENST00000641738 218 ntBASIC11.22□□□□□ -0.61
LITAFQ99732 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LITAFQ99732 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LITAFQ99732 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.22□□□□□ -0.61
LITAFQ99732 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms