Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LYSTQ99698 AC012313.1-201ENST00000593393 3059 ntBASIC11.52□□□□□ -0.57
LYSTQ99698 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LYSTQ99698 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.52□□□□□ -0.57
LYSTQ99698 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LYSTQ99698 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.51□□□□□ -0.57
LYSTQ99698 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.51□□□□□ -0.57
LYSTQ99698 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC11.51□□□□□ -0.57
LYSTQ99698 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC092506.1-202ENST00000401022 528 ntBASIC11.51□□□□□ -0.57
LYSTQ99698 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 CSF2RBP1-201ENST00000447905 391 ntBASIC11.51□□□□□ -0.57
LYSTQ99698 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.51□□□□□ -0.57
LYSTQ99698 RN7SL190P-201ENST00000582519 257 ntBASIC11.51□□□□□ -0.57
LYSTQ99698 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.51□□□□□ -0.57
LYSTQ99698 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC106820.2-201ENST00000563775 3264 ntBASIC11.51□□□□□ -0.57
LYSTQ99698 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC099336.1-201ENST00000417053 1171 ntBASIC11.51□□□□□ -0.57
LYSTQ99698 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.51□□□□□ -0.57
LYSTQ99698 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 EML3-217ENST00000531557 2509 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LYSTQ99698 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.51□□□□□ -0.57
LYSTQ99698 AC092053.1-201ENST00000605787 1936 ntBASIC11.5□□□□□ -0.57
LYSTQ99698 AC018470.1-201ENST00000624790 3129 ntBASIC11.5□□□□□ -0.57
LYSTQ99698 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.5□□□□□ -0.57
LYSTQ99698 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 SPDYE19P-201ENST00000338590 713 ntBASIC11.5□□□□□ -0.57
LYSTQ99698 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.5□□□□□ -0.57
LYSTQ99698 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC11.5□□□□□ -0.57
LYSTQ99698 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.5□□□□□ -0.57
LYSTQ99698 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LYSTQ99698 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.5□□□□□ -0.57
LYSTQ99698 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC11.5□□□□□ -0.57
LYSTQ99698 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 AC098850.1-201ENST00000419919 790 ntBASIC11.5□□□□□ -0.57
LYSTQ99698 IGHV3-52-201ENST00000519770 353 ntBASIC11.5□□□□□ -0.57
LYSTQ99698 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.5□□□□□ -0.57
LYSTQ99698 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.5□□□□□ -0.57
LYSTQ99698 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.5□□□□□ -0.57
LYSTQ99698 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LYSTQ99698 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LYSTQ99698 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.49□□□□□ -0.57
LYSTQ99698 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LYSTQ99698 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LYSTQ99698 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
LYSTQ99698 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LYSTQ99698 AC087499.6-201ENST00000411576 835 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms