Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC104640.1-201ENST00000562617 2109 ntBASIC13.73□□□□□ -0.21
RAB40CQ96S21 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 AL137013.1-201ENST00000432946 1228 ntBASIC13.73□□□□□ -0.21
RAB40CQ96S21 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 AL031432.5-201ENST00000641059 760 ntBASIC13.73□□□□□ -0.21
RAB40CQ96S21 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.73□□□□□ -0.21
RAB40CQ96S21 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB40CQ96S21 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 LINC00895-201ENST00000629028 1637 ntBASIC13.72□□□□□ -0.21
RAB40CQ96S21 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AC009336.1-201ENST00000608941 1553 ntBASIC13.72□□□□□ -0.21
RAB40CQ96S21 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 STK19B-204ENST00000512515 211 ntBASIC13.72□□□□□ -0.21
RAB40CQ96S21 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AC010203.1-204ENST00000548782 407 ntBASIC13.72□□□□□ -0.21
RAB40CQ96S21 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 AL138966.2-201ENST00000621997 464 ntBASIC13.72□□□□□ -0.21
RAB40CQ96S21 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RAB40CQ96S21 KRT8P10-201ENST00000450021 1447 ntBASIC13.72□□□□□ -0.21
RAB40CQ96S21 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB40CQ96S21 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms