Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 AC093909.1-201ENST00000504731 1122 ntBASIC19.95■□□□□ 0.78
NEK1Q96PY6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEK1Q96PY6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.95■□□□□ 0.78
NEK1Q96PY6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.94■□□□□ 0.78
NEK1Q96PY6 AL353732.1-201ENST00000569618 1459 ntBASIC19.94■□□□□ 0.78
NEK1Q96PY6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
NEK1Q96PY6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEK1Q96PY6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 AL671710.1-201ENST00000610245 2349 ntBASIC19.93■□□□□ 0.78
NEK1Q96PY6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.93■□□□□ 0.78
NEK1Q96PY6 AC108751.1-201ENST00000490852 363 ntBASIC19.93■□□□□ 0.78
NEK1Q96PY6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 UNC93B6-202ENST00000528242 690 ntBASIC19.93■□□□□ 0.78
NEK1Q96PY6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 OR6D1P-203ENST00000641209 4860 ntBASIC19.93■□□□□ 0.78
NEK1Q96PY6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEK1Q96PY6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NEK1Q96PY6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 PCDHB19P-201ENST00000570871 2371 ntBASIC19.92■□□□□ 0.78
NEK1Q96PY6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms