Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 PGM5P2-202ENST00000637225 1043 ntBASIC19.6■□□□□ 0.73
PGBD1Q96JS3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PGBD1Q96JS3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 ZNF259P1-201ENST00000407656 1365 ntBASIC19.59■□□□□ 0.73
PGBD1Q96JS3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 AP002414.1-201ENST00000391405 1147 ntBASIC19.59■□□□□ 0.73
PGBD1Q96JS3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.59■□□□□ 0.73
PGBD1Q96JS3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 CICP6-201ENST00000457191 2729 ntBASIC19.58■□□□□ 0.73
PGBD1Q96JS3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.58■□□□□ 0.73
PGBD1Q96JS3 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 OR7E47P-204ENST00000575924 449 ntBASIC19.58■□□□□ 0.72
PGBD1Q96JS3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 TERC-201ENST00000602385 541 ntBASIC19.58■□□□□ 0.72
PGBD1Q96JS3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD1Q96JS3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 HLA-A-202ENST00000376806 1854 ntBASIC19.57■□□□□ 0.72
PGBD1Q96JS3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 DUX4L17-201ENST00000557360 1267 ntBASIC19.57■□□□□ 0.72
PGBD1Q96JS3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 AC026691.1-201ENST00000602502 2017 ntBASIC19.57■□□□□ 0.72
PGBD1Q96JS3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 AC046158.3-201ENST00000624947 2558 ntBASIC19.57■□□□□ 0.72
PGBD1Q96JS3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PGBD1Q96JS3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PGBD1Q96JS3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PGBD1Q96JS3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PGBD1Q96JS3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.56■□□□□ 0.72
PGBD1Q96JS3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.56■□□□□ 0.72
PGBD1Q96JS3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PGBD1Q96JS3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms