Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PRSS29P-201ENST00000440800 595 ntBASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 KRT126P-201ENST00000549467 1181 ntBASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 AL773604.1-201ENST00000617417 272 ntBASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 AL671710.1-201ENST00000610245 2349 ntBASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM5Q96HC4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 AL031284.1-201ENST00000419297 478 ntBASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 FAM185BP-201ENST00000443595 716 ntBASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM5Q96HC4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 GGT4P-201ENST00000623672 1708 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AL031731.1-201ENST00000642131 2094 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AC108073.2-201ENST00000464002 357 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms