Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 MIR4674-201ENST00000582457 87 ntBASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 MYC-209ENST00000641252 345 ntBASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHCHD1Q96BP2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 GPR89P-201ENST00000407924 1495 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 RPS2P4-201ENST00000476944 856 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 WWOX-216ENST00000569818 525 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 AP000692.2-201ENST00000608391 879 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 CICP4-201ENST00000447359 2812 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 LINC01101-201ENST00000622953 1884 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 AC096733.2-201ENST00000609937 1394 ntBASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHCHD1Q96BP2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHCHD1Q96BP2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms