Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 AC025580.3-201ENST00000617932 1424 ntBASIC14.94□□□□□ -0.02
APH1AQ96BI3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 FER1L4-210ENST00000615531 5998 ntBASIC14.94□□□□□ -0.02
APH1AQ96BI3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 HCG4-201ENST00000418983 998 ntBASIC14.94□□□□□ -0.02
APH1AQ96BI3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 AP002490.2-201ENST00000524791 560 ntBASIC14.94□□□□□ -0.02
APH1AQ96BI3 KRT19P2-202ENST00000557173 1012 ntBASIC14.94□□□□□ -0.02
APH1AQ96BI3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APH1AQ96BI3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APH1AQ96BI3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 BX842568.4-201ENST00000421222 227 ntBASIC14.93□□□□□ -0.02
APH1AQ96BI3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PDPK2P-202ENST00000562415 1191 ntBASIC14.93□□□□□ -0.02
APH1AQ96BI3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 MPDU1-223ENST00000582151 728 ntBASIC14.93□□□□□ -0.02
APH1AQ96BI3 MIR4515-201ENST00000584082 81 ntBASIC14.93□□□□□ -0.02
APH1AQ96BI3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.93□□□□□ -0.02
APH1AQ96BI3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APH1AQ96BI3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APH1AQ96BI3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 AC012569.1-201ENST00000591191 1524 ntBASIC14.92□□□□□ -0.02
APH1AQ96BI3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
APH1AQ96BI3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.92□□□□□ -0.02
APH1AQ96BI3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.92□□□□□ -0.02
APH1AQ96BI3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APH1AQ96BI3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.92□□□□□ -0.02
APH1AQ96BI3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.92□□□□□ -0.02
APH1AQ96BI3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms