Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 KRT18P35-201ENST00000510488 1269 ntBASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 KRT8P49-201ENST00000604166 1432 ntBASIC17.52■□□□□ 0.4
ATG4AQ8WYN0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 AL513523.2-202ENST00000427283 2040 ntBASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.52■□□□□ 0.39
ATG4AQ8WYN0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 AC006538.1-201ENST00000567905 1585 ntBASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 TERC-201ENST00000602385 541 ntBASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 AC093458.2-201ENST00000623150 629 ntBASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.51■□□□□ 0.39
ATG4AQ8WYN0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 PAUPAR-201ENST00000630360 2965 ntBASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 AL162727.3-201ENST00000635661 2787 ntBASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 AL732292.2-201ENST00000609649 430 ntBASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATG4AQ8WYN0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms