Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCD2Q8WV60 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCD2Q8WV60 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCD2Q8WV60 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCD2Q8WV60 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.13■□□□□ 0.33
PTCD2Q8WV60 KRT8P49-201ENST00000604166 1432 ntBASIC17.13■□□□□ 0.33
PTCD2Q8WV60 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 AC009947.1-201ENST00000444350 727 ntBASIC17.12■□□□□ 0.33
PTCD2Q8WV60 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 AC006557.2-201ENST00000592985 1240 ntBASIC17.12■□□□□ 0.33
PTCD2Q8WV60 Z83851.2-201ENST00000609564 659 ntBASIC17.12■□□□□ 0.33
PTCD2Q8WV60 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCD2Q8WV60 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 AC136632.2-201ENST00000512891 861 ntBASIC17.11■□□□□ 0.33
PTCD2Q8WV60 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCD2Q8WV60 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTCD2Q8WV60 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms