Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 AL031284.1-201ENST00000419297 478 ntBASIC16.3■□□□□ 0.2
KRT78Q8N1N4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 AC011676.5-201ENST00000624864 2660 ntBASIC16.3■□□□□ 0.2
KRT78Q8N1N4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 AP002414.3-201ENST00000589352 1468 ntBASIC16.29■□□□□ 0.2
KRT78Q8N1N4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 AC002310.6-201ENST00000624451 1377 ntBASIC16.29■□□□□ 0.2
KRT78Q8N1N4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 IGHV3-65-201ENST00000523210 341 ntBASIC16.29■□□□□ 0.2
KRT78Q8N1N4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 AC012640.2-201ENST00000561606 901 ntBASIC16.29■□□□□ 0.2
KRT78Q8N1N4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT78Q8N1N4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AC092910.1-201ENST00000482027 1129 ntBASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AP001005.1-201ENST00000571755 1248 ntBASIC16.28■□□□□ 0.2
KRT78Q8N1N4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT78Q8N1N4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
KRT78Q8N1N4 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.2
KRT78Q8N1N4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms