Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 AL356488.2-201ENST00000602755 427 ntBASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 FAM215A-202ENST00000632077 792 ntBASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 AL603756.1-201ENST00000606511 2163 ntBASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 TPM4P1-201ENST00000436100 807 ntBASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 AL773604.1-201ENST00000617417 272 ntBASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 GGTLC5P-201ENST00000617623 998 ntBASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC116Q8IYX3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 AC002310.6-201ENST00000624451 1377 ntBASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 AL031284.1-201ENST00000419297 478 ntBASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 SLC25A6P2-201ENST00000497974 877 ntBASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC116Q8IYX3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms