Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AC092068.3-201ENST00000587894 2016 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 NSUN5P1-202ENST00000421140 1535 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 NSUN5P2-203ENST00000457352 1529 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 SIGLEC30P-201ENST00000455569 941 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AC091607.1-201ENST00000490318 1060 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AC104819.1-201ENST00000504587 486 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 TPSP2-201ENST00000561760 610 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AP005901.3-202ENST00000581653 237 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AP002414.4-201ENST00000589764 1148 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AL118508.1-201ENST00000613502 2345 ntBASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
MRPL55Q7Z7F7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 INTS4P1-201ENST00000438455 1935 ntBASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TSPY26P-202ENST00000565928 3884 ntBASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AL020989.1-201ENST00000422979 469 ntBASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 FAM210CP-201ENST00000445714 574 ntBASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AP002490.2-201ENST00000524791 560 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms