Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 AGGF1P2-201ENST00000426656 2106 ntBASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
RFPL4BQ6ZWI9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 AC144831.1-201ENST00000573312 2656 ntBASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 AC109462.3-201ENST00000573934 613 ntBASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 AL732292.2-201ENST00000609649 430 ntBASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
RFPL4BQ6ZWI9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 PAUPAR-201ENST00000630360 2965 ntBASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 MIR5100-201ENST00000579544 119 ntBASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.18■□□□□ 0.02
RFPL4BQ6ZWI9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms