Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.6■□□□□ 0.41
RFWD3Q6PCD5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 YBX2P1-201ENST00000394192 760 ntBASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 CXCL1P1-201ENST00000502804 216 ntBASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 AC096734.2-201ENST00000562054 433 ntBASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 AC002347.1-201ENST00000569543 541 ntBASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 AC010327.4-202ENST00000591484 748 ntBASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PCDHA14-201ENST00000506751 2298 ntBASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFWD3Q6PCD5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFWD3Q6PCD5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 BCAR1-209ENST00000546196 1340 ntBASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 ACTL9-202ENST00000612068 1252 ntBASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFWD3Q6PCD5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 AC092053.1-201ENST00000605787 1936 ntBASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 AC004832.2-201ENST00000426397 482 ntBASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 RHOQP3-201ENST00000437982 621 ntBASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 FAM185BP-201ENST00000443595 716 ntBASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.57■□□□□ 0.4
RFWD3Q6PCD5 AC107918.2-201ENST00000530817 355 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms