Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TMEM53Q6P2H8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 ATP5G2P1-201ENST00000433580 426 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 TOB2P1-201ENST00000469761 992 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 AC092329.2-201ENST00000598402 547 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 AL353801.3-201ENST00000609898 542 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 AC006449.5-201ENST00000610658 2098 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 AL513523.2-202ENST00000427283 2040 ntBASIC15.55■□□□□ 0.08
TMEM53Q6P2H8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 TNRC18P2-201ENST00000417666 2714 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 BX276092.7-203ENST00000637198 1536 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 AC233702.3-201ENST00000578656 1387 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 AP002383.4-201ENST00000442518 975 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 MINOS1P3-201ENST00000457048 203 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 TPSP2-201ENST00000561760 610 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 AC092171.3-201ENST00000610122 2651 ntBASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM53Q6P2H8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms