Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 KRT18P65-201ENST00000439811 1286 ntBASIC12.79□□□□□ -0.36
MRPL54Q6P161 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 AC022517.1-201ENST00000592429 346 ntBASIC12.79□□□□□ -0.36
MRPL54Q6P161 AC124016.1-201ENST00000609552 612 ntBASIC12.79□□□□□ -0.36
MRPL54Q6P161 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.79□□□□□ -0.36
MRPL54Q6P161 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MRPL54Q6P161 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 AC013268.4-201ENST00000637413 2228 ntBASIC12.78□□□□□ -0.36
MRPL54Q6P161 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 ME2P1-201ENST00000426028 1970 ntBASIC12.78□□□□□ -0.36
MRPL54Q6P161 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 MESTP1-201ENST00000404287 994 ntBASIC12.78□□□□□ -0.36
MRPL54Q6P161 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 WWOX-216ENST00000569818 525 ntBASIC12.78□□□□□ -0.36
MRPL54Q6P161 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MRPL54Q6P161 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MRPL54Q6P161 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms