Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC021097.1-201ENST00000607902 574 ntBASIC20.57■□□□□ 0.88
CCDC93Q567U6 AC131009.4-201ENST00000624048 1740 ntBASIC20.57■□□□□ 0.88
CCDC93Q567U6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC93Q567U6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC93Q567U6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC93Q567U6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC93Q567U6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 AC087499.5-201ENST00000452760 1342 ntBASIC20.56■□□□□ 0.88
CCDC93Q567U6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 AL353779.1-201ENST00000434793 351 ntBASIC20.56■□□□□ 0.88
CCDC93Q567U6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 HILS1-202ENST00000545329 423 ntBASIC20.56■□□□□ 0.88
CCDC93Q567U6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.56■□□□□ 0.88
CCDC93Q567U6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 TEX28P1-201ENST00000613479 1221 ntBASIC20.56■□□□□ 0.88
CCDC93Q567U6 TEX28P2-201ENST00000617764 1221 ntBASIC20.56■□□□□ 0.88
CCDC93Q567U6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC93Q567U6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 PRORSD1P-202ENST00000563365 2154 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 HLA-H-201ENST00000383620 1096 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 KRT18P34-201ENST00000488218 1270 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 AC010336.2-201ENST00000564226 506 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 MPDU1-223ENST00000582151 728 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 AL844908.2-201ENST00000609461 460 ntBASIC20.55■□□□□ 0.88
CCDC93Q567U6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC93Q567U6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC93Q567U6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC93Q567U6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC93Q567U6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms