Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.71■□□□□ 0.91
DDR1Q08345 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.71■□□□□ 0.91
DDR1Q08345 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.71■□□□□ 0.91
DDR1Q08345 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDR1Q08345 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.71■□□□□ 0.91
DDR1Q08345 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
DDR1Q08345 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.7■□□□□ 0.91
DDR1Q08345 AC116353.5-201ENST00000638148 1699 ntBASIC20.7■□□□□ 0.91
DDR1Q08345 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.7■□□□□ 0.9
DDR1Q08345 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
DDR1Q08345 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.7■□□□□ 0.9
DDR1Q08345 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DDR1Q08345 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.7■□□□□ 0.9
DDR1Q08345 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.7■□□□□ 0.9
DDR1Q08345 AC245100.3-201ENST00000441281 285 ntBASIC20.7■□□□□ 0.9
DDR1Q08345 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.7■□□□□ 0.9
DDR1Q08345 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DDR1Q08345 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
DDR1Q08345 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.7■□□□□ 0.9
DDR1Q08345 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.7■□□□□ 0.9
DDR1Q08345 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDR1Q08345 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.69■□□□□ 0.9
DDR1Q08345 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DDR1Q08345 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.69■□□□□ 0.9
DDR1Q08345 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 AL589987.1-201ENST00000453380 819 ntBASIC20.69■□□□□ 0.9
DDR1Q08345 ELK1P1-201ENST00000485699 580 ntBASIC20.69■□□□□ 0.9
DDR1Q08345 AC055876.2-201ENST00000531834 546 ntBASIC20.69■□□□□ 0.9
DDR1Q08345 SNX29P1-201ENST00000548357 1007 ntBASIC20.69■□□□□ 0.9
DDR1Q08345 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
DDR1Q08345 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DDR1Q08345 SRD5A3P1-201ENST00000603021 949 ntBASIC20.69■□□□□ 0.9
DDR1Q08345 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.69■□□□□ 0.9
DDR1Q08345 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDR1Q08345 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.68■□□□□ 0.9
DDR1Q08345 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.68■□□□□ 0.9
DDR1Q08345 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DDR1Q08345 AC098850.1-201ENST00000419919 790 ntBASIC20.68■□□□□ 0.9
DDR1Q08345 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.68■□□□□ 0.9
DDR1Q08345 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.68■□□□□ 0.9
DDR1Q08345 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.68■□□□□ 0.9
DDR1Q08345 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.68■□□□□ 0.9
DDR1Q08345 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.68■□□□□ 0.9
DDR1Q08345 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.68■□□□□ 0.9
DDR1Q08345 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
DDR1Q08345 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDR1Q08345 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.68■□□□□ 0.9
DDR1Q08345 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.68■□□□□ 0.9
DDR1Q08345 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDR1Q08345 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DDR1Q08345 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms