Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SSBP1Q04837 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 AC006277.1-201ENST00000624348 1610 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 MIR662-201ENST00000384847 95 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 NAPSB-206ENST00000562112 1266 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 AC005332.3-201ENST00000589904 676 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 AC141257.4-201ENST00000634557 245 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 AC136944.6-201ENST00000634818 245 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SSBP1Q04837 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 KRT8P49-201ENST00000604166 1432 ntBASIC14.31□□□□□ -0.12
SSBP1Q04837 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SSBP1Q04837 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.3□□□□□ -0.12
SSBP1Q04837 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SSBP1Q04837 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SSBP1Q04837 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.3□□□□□ -0.12
SSBP1Q04837 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SSBP1Q04837 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SSBP1Q04837 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.3□□□□□ -0.12
SSBP1Q04837 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.3□□□□□ -0.12
SSBP1Q04837 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP1Q04837 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms