Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 AC009090.5-201ENST00000624886 2285 ntBASIC17.65■□□□□ 0.42
CBX1P83916 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.65■□□□□ 0.42
CBX1P83916 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.65■□□□□ 0.42
CBX1P83916 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.65■□□□□ 0.42
CBX1P83916 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CBX1P83916 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.65■□□□□ 0.42
CBX1P83916 AC093787.1-201ENST00000450396 207 ntBASIC17.65■□□□□ 0.42
CBX1P83916 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.65■□□□□ 0.42
CBX1P83916 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.65■□□□□ 0.42
CBX1P83916 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.65■□□□□ 0.42
CBX1P83916 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.65■□□□□ 0.42
CBX1P83916 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.65■□□□□ 0.42
CBX1P83916 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CBX1P83916 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.65■□□□□ 0.42
CBX1P83916 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CBX1P83916 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CBX1P83916 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CBX1P83916 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.64■□□□□ 0.41
CBX1P83916 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.64■□□□□ 0.41
CBX1P83916 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CBX1P83916 AL512625.2-201ENST00000417533 625 ntBASIC17.64■□□□□ 0.41
CBX1P83916 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CBX1P83916 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CBX1P83916 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.64■□□□□ 0.41
CBX1P83916 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CBX1P83916 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.63■□□□□ 0.41
CBX1P83916 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.63■□□□□ 0.41
CBX1P83916 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CBX1P83916 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CBX1P83916 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CBX1P83916 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms