Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-1P78426 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-1P78426 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-1P78426 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NKX6-1P78426 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-1P78426 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-1P78426 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-1P78426 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NKX6-1P78426 AL353135.1-201ENST00000606729 504 ntBASIC14.92□□□□□ -0.02
NKX6-1P78426 AL078644.1-201ENST00000609881 752 ntBASIC14.92□□□□□ -0.02
NKX6-1P78426 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-1P78426 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
NKX6-1P78426 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 AC018695.7-201ENST00000624587 2492 ntBASIC14.92□□□□□ -0.02
NKX6-1P78426 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 ELL2P1-201ENST00000413990 1906 ntBASIC14.92□□□□□ -0.02
NKX6-1P78426 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NKX6-1P78426 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NKX6-1P78426 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 ELK2BP-201ENST00000415014 1224 ntBASIC14.91□□□□□ -0.02
NKX6-1P78426 VN2R19P-201ENST00000442399 1052 ntBASIC14.91□□□□□ -0.02
NKX6-1P78426 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-1P78426 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 AC018845.2-201ENST00000568326 409 ntBASIC14.91□□□□□ -0.02
NKX6-1P78426 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 AL513190.1-201ENST00000621254 727 ntBASIC14.91□□□□□ -0.02
NKX6-1P78426 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.91□□□□□ -0.02
NKX6-1P78426 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-1P78426 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-1P78426 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC006504.4-201ENST00000592118 1568 ntBASIC14.9□□□□□ -0.02
NKX6-1P78426 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-1P78426 GPR89P-201ENST00000407924 1495 ntBASIC14.9□□□□□ -0.02
NKX6-1P78426 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-1P78426 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-1P78426 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms