Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22■■□□□ 1.11
RIPK4P57078 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22■■□□□ 1.11
RIPK4P57078 AC211486.1-202ENST00000416371 468 ntBASIC22■■□□□ 1.11
RIPK4P57078 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
RIPK4P57078 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22■■□□□ 1.11
RIPK4P57078 AC211476.1-201ENST00000503899 468 ntBASIC22■■□□□ 1.11
RIPK4P57078 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
RIPK4P57078 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22■■□□□ 1.11
RIPK4P57078 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
RIPK4P57078 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RIPK4P57078 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC22■■□□□ 1.11
RIPK4P57078 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RIPK4P57078 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC22■■□□□ 1.11
RIPK4P57078 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22■■□□□ 1.11
RIPK4P57078 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RIPK4P57078 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.99■■□□□ 1.11
RIPK4P57078 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.99■■□□□ 1.11
RIPK4P57078 AP002490.2-201ENST00000524791 560 ntBASIC21.99■■□□□ 1.11
RIPK4P57078 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.99■■□□□ 1.11
RIPK4P57078 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.99■■□□□ 1.11
RIPK4P57078 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.99■■□□□ 1.11
RIPK4P57078 AL691403.2-201ENST00000618460 490 ntBASIC21.99■■□□□ 1.11
RIPK4P57078 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RIPK4P57078 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 AL603756.1-201ENST00000606511 2163 ntBASIC21.99■■□□□ 1.11
RIPK4P57078 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RIPK4P57078 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.99■■□□□ 1.11
RIPK4P57078 AC078925.2-201ENST00000624013 1973 ntBASIC21.99■■□□□ 1.11
RIPK4P57078 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RIPK4P57078 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.98■■□□□ 1.11
RIPK4P57078 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.98■■□□□ 1.11
RIPK4P57078 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.98■■□□□ 1.11
RIPK4P57078 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 AC106886.4-201ENST00000623557 2502 ntBASIC21.98■■□□□ 1.11
RIPK4P57078 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 ACTG1P14-201ENST00000446382 1122 ntBASIC21.98■■□□□ 1.11
RIPK4P57078 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.98■■□□□ 1.11
RIPK4P57078 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.98■■□□□ 1.11
RIPK4P57078 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.98■■□□□ 1.11
RIPK4P57078 AC109635.5-201ENST00000533593 962 ntBASIC21.98■■□□□ 1.11
RIPK4P57078 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.98■■□□□ 1.11
RIPK4P57078 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.98■■□□□ 1.11
RIPK4P57078 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.98■■□□□ 1.11
RIPK4P57078 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.98■■□□□ 1.11
RIPK4P57078 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RIPK4P57078 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RIPK4P57078 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIPK4P57078 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms