Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PRIM2P49643 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRIM2P49643 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PRIM2P49643 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.11■□□□□ 0.17
PRIM2P49643 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 AL596257.1-201ENST00000641463 2694 ntBASIC16.11■□□□□ 0.17
PRIM2P49643 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.11■□□□□ 0.17
PRIM2P49643 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.11■□□□□ 0.17
PRIM2P49643 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.11■□□□□ 0.17
PRIM2P49643 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.11■□□□□ 0.17
PRIM2P49643 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.11■□□□□ 0.17
PRIM2P49643 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.11■□□□□ 0.17
PRIM2P49643 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.11■□□□□ 0.17
PRIM2P49643 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRIM2P49643 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.1■□□□□ 0.17
PRIM2P49643 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.1■□□□□ 0.17
PRIM2P49643 FOSL1P1-201ENST00000511041 816 ntBASIC16.1■□□□□ 0.17
PRIM2P49643 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.1■□□□□ 0.17
PRIM2P49643 AL121772.3-201ENST00000610840 674 ntBASIC16.1■□□□□ 0.17
PRIM2P49643 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.1■□□□□ 0.17
PRIM2P49643 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PRIM2P49643 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRIM2P49643 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRIM2P49643 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 FRMD8P1-201ENST00000440433 1524 ntBASIC16.09■□□□□ 0.17
PRIM2P49643 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 AC079776.2-201ENST00000641154 1609 ntBASIC16.09■□□□□ 0.17
PRIM2P49643 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 ACTG1P4-201ENST00000425123 1122 ntBASIC16.09■□□□□ 0.17
PRIM2P49643 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PRIM2P49643 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.09■□□□□ 0.17
PRIM2P49643 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.09■□□□□ 0.17
PRIM2P49643 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRIM2P49643 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PRIM2P49643 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
PRIM2P49643 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRIM2P49643 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRIM2P49643 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PRIM2P49643 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRIM2P49643 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRIM2P49643 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms