Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CSNK1A1P48729 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.04■□□□□ -0
CSNK1A1P48729 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CSNK1A1P48729 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.04■□□□□ -0
CSNK1A1P48729 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.04■□□□□ -0
CSNK1A1P48729 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
CSNK1A1P48729 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 MRPL3P1-201ENST00000400109 1033 ntBASIC15.03■□□□□ -0
CSNK1A1P48729 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.03■□□□□ -0
CSNK1A1P48729 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.03■□□□□ -0
CSNK1A1P48729 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
CSNK1A1P48729 AC092910.1-201ENST00000482027 1129 ntBASIC15.03■□□□□ -0
CSNK1A1P48729 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.03■□□□□ -0
CSNK1A1P48729 AP001005.1-201ENST00000571755 1248 ntBASIC15.03■□□□□ -0
CSNK1A1P48729 AC008667.4-201ENST00000607370 168 ntBASIC15.03■□□□□ -0
CSNK1A1P48729 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.03■□□□□ -0
CSNK1A1P48729 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CSNK1A1P48729 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSNK1A1P48729 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CSNK1A1P48729 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 TNRC18P3-201ENST00000441896 2691 ntBASIC15.02■□□□□ -0
CSNK1A1P48729 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CSNK1A1P48729 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.02■□□□□ -0
CSNK1A1P48729 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.02■□□□□ -0
CSNK1A1P48729 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.02■□□□□ -0
CSNK1A1P48729 TOP3BP1-201ENST00000420768 1380 ntBASIC15.02■□□□□ -0
CSNK1A1P48729 AC002310.6-201ENST00000624451 1377 ntBASIC15.02■□□□□ -0
CSNK1A1P48729 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CSNK1A1P48729 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1A1P48729 IGHV3-65-201ENST00000523210 341 ntBASIC15.02■□□□□ -0
CSNK1A1P48729 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.02■□□□□ -0
CSNK1A1P48729 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.02■□□□□ -0
CSNK1A1P48729 MIR7706-201ENST00000613747 67 ntBASIC15.02■□□□□ -0
CSNK1A1P48729 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CSNK1A1P48729 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSNK1A1P48729 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSNK1A1P48729 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CSNK1A1P48729 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms