Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 AC064862.7-201ENST00000604520 867 ntBASIC17.59■□□□□ 0.41
MMP13P45452 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP13P45452 AL031008.1-201ENST00000619963 541 ntBASIC17.59■□□□□ 0.41
MMP13P45452 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
MMP13P45452 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MMP13P45452 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.59■□□□□ 0.41
MMP13P45452 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 AC105917.1-201ENST00000506637 2539 ntBASIC17.59■□□□□ 0.41
MMP13P45452 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.59■□□□□ 0.41
MMP13P45452 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP13P45452 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP13P45452 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP13P45452 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MMP13P45452 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.41
MMP13P45452 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP13P45452 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP13P45452 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP13P45452 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP13P45452 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP13P45452 TPM4P1-201ENST00000436100 807 ntBASIC17.58■□□□□ 0.4
MMP13P45452 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP13P45452 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP13P45452 FAM197Y8-203ENST00000450145 560 ntBASIC17.58■□□□□ 0.4
MMP13P45452 AC073648.2-201ENST00000510116 352 ntBASIC17.58■□□□□ 0.4
MMP13P45452 AC124947.2-201ENST00000547118 1133 ntBASIC17.58■□□□□ 0.4
MMP13P45452 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.58■□□□□ 0.4
MMP13P45452 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP13P45452 AC025062.2-201ENST00000605477 670 ntBASIC17.58■□□□□ 0.4
MMP13P45452 AL589182.2-201ENST00000619332 1049 ntBASIC17.58■□□□□ 0.4
MMP13P45452 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP13P45452 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MMP13P45452 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP13P45452 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP13P45452 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP13P45452 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP13P45452 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MMP13P45452 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.57■□□□□ 0.4
MMP13P45452 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.57■□□□□ 0.4
MMP13P45452 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
MMP13P45452 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
MMP13P45452 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP13P45452 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP13P45452 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP13P45452 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MMP13P45452 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP13P45452 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP13P45452 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.57■□□□□ 0.4
MMP13P45452 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP13P45452 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP13P45452 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP13P45452 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP13P45452 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.56■□□□□ 0.4
MMP13P45452 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 RNPS1P1-201ENST00000507437 918 ntBASIC17.56■□□□□ 0.4
MMP13P45452 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP13P45452 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP13P45452 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP13P45452 AC139887.3-201ENST00000568585 713 ntBASIC17.56■□□□□ 0.4
MMP13P45452 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP13P45452 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.56■□□□□ 0.4
MMP13P45452 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms