Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RFC5P40937 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 PCDHB17P-201ENST00000539533 2393 ntBASIC18.56■□□□□ 0.56
RFC5P40937 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
RFC5P40937 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.56■□□□□ 0.56
RFC5P40937 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC5P40937 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 RN7SL589P-201ENST00000481268 310 ntBASIC18.56■□□□□ 0.56
RFC5P40937 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.56■□□□□ 0.56
RFC5P40937 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFC5P40937 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.56■□□□□ 0.56
RFC5P40937 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.56■□□□□ 0.56
RFC5P40937 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC5P40937 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC5P40937 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 AP001094.4-201ENST00000579008 2176 ntBASIC18.56■□□□□ 0.56
RFC5P40937 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.56■□□□□ 0.56
RFC5P40937 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
RFC5P40937 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC5P40937 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RFC5P40937 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RFC5P40937 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RFC5P40937 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RFC5P40937 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC5P40937 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RFC5P40937 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC5P40937 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RFC5P40937 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC5P40937 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.55■□□□□ 0.56
RFC5P40937 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
RFC5P40937 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC5P40937 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC5P40937 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RFC5P40937 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RFC5P40937 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RFC5P40937 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RFC5P40937 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC5P40937 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC5P40937 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 TFAMP1-201ENST00000412727 736 ntBASIC18.54■□□□□ 0.56
RFC5P40937 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC5P40937 SPDYE11-202ENST00000450699 704 ntBASIC18.54■□□□□ 0.56
RFC5P40937 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.54■□□□□ 0.56
RFC5P40937 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
RFC5P40937 SPDYE9P-201ENST00000570642 692 ntBASIC18.54■□□□□ 0.56
RFC5P40937 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC5P40937 AC022145.2-201ENST00000598203 171 ntBASIC18.54■□□□□ 0.56
RFC5P40937 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC5P40937 AC004835.2-201ENST00000603762 682 ntBASIC18.54■□□□□ 0.56
RFC5P40937 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC5P40937 SPDYE10P-202ENST00000612005 668 ntBASIC18.54■□□□□ 0.56
RFC5P40937 SPDYE8P-202ENST00000612377 668 ntBASIC18.54■□□□□ 0.56
RFC5P40937 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFC5P40937 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RFC5P40937 WASH6P-202ENST00000359512 1437 ntBASIC18.54■□□□□ 0.56
RFC5P40937 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFC5P40937 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC5P40937 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC5P40937 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms