Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.95□□□□□ -0.18
SNCAP37840 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 SPDYE15P-201ENST00000424157 909 ntBASIC13.95□□□□□ -0.18
SNCAP37840 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.95□□□□□ -0.18
SNCAP37840 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 YBX1P2-201ENST00000489612 999 ntBASIC13.95□□□□□ -0.18
SNCAP37840 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 AC139887.4-201ENST00000607877 719 ntBASIC13.95□□□□□ -0.18
SNCAP37840 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.95□□□□□ -0.18
SNCAP37840 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SNCAP37840 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNCAP37840 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
SNCAP37840 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNCAP37840 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.94□□□□□ -0.18
SNCAP37840 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SNCAP37840 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 MYCLP1-201ENST00000372451 1075 ntBASIC13.94□□□□□ -0.18
SNCAP37840 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 MIR662-201ENST00000384847 95 ntBASIC13.94□□□□□ -0.18
SNCAP37840 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SNCAP37840 HOMER2P1-201ENST00000455653 964 ntBASIC13.94□□□□□ -0.18
SNCAP37840 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 AC068472.1-201ENST00000474589 881 ntBASIC13.94□□□□□ -0.18
SNCAP37840 AC002558.1-201ENST00000488906 803 ntBASIC13.94□□□□□ -0.18
SNCAP37840 IGHV3-52-201ENST00000519770 353 ntBASIC13.94□□□□□ -0.18
SNCAP37840 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.94□□□□□ -0.18
SNCAP37840 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.94□□□□□ -0.18
SNCAP37840 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SNCAP37840 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNCAP37840 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.93□□□□□ -0.18
SNCAP37840 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SNCAP37840 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNCAP37840 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.93□□□□□ -0.18
SNCAP37840 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms