Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 AC002310.6-201ENST00000624451 1377 ntBASIC17.8■□□□□ 0.44
RFC1P35251 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RFC1P35251 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RFC1P35251 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFC1P35251 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.8■□□□□ 0.44
RFC1P35251 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.8■□□□□ 0.44
RFC1P35251 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.8■□□□□ 0.44
RFC1P35251 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.8■□□□□ 0.44
RFC1P35251 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.8■□□□□ 0.44
RFC1P35251 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.8■□□□□ 0.44
RFC1P35251 AC105339.3-201ENST00000560043 636 ntBASIC17.8■□□□□ 0.44
RFC1P35251 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.8■□□□□ 0.44
RFC1P35251 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 FAM215A-202ENST00000632077 792 ntBASIC17.8■□□□□ 0.44
RFC1P35251 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 AL603756.1-201ENST00000606511 2163 ntBASIC17.8■□□□□ 0.44
RFC1P35251 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.8■□□□□ 0.44
RFC1P35251 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 AL391256.1-201ENST00000443260 1855 ntBASIC17.8■□□□□ 0.44
RFC1P35251 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.79■□□□□ 0.44
RFC1P35251 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.79■□□□□ 0.44
RFC1P35251 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.79■□□□□ 0.44
RFC1P35251 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 MRPL3P1-201ENST00000400109 1033 ntBASIC17.79■□□□□ 0.44
RFC1P35251 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.79■□□□□ 0.44
RFC1P35251 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.79■□□□□ 0.44
RFC1P35251 SLC25A6P2-201ENST00000497974 877 ntBASIC17.79■□□□□ 0.44
RFC1P35251 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 AL356488.2-201ENST00000602755 427 ntBASIC17.79■□□□□ 0.44
RFC1P35251 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFC1P35251 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.79■□□□□ 0.44
RFC1P35251 UBALD1-205ENST00000590891 2641 ntBASIC17.79■□□□□ 0.44
RFC1P35251 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RFC1P35251 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.79■□□□□ 0.44
RFC1P35251 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.78■□□□□ 0.44
RFC1P35251 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 AL049840.3-201ENST00000602669 611 ntBASIC17.78■□□□□ 0.44
RFC1P35251 REXO1L3P-201ENST00000622202 1288 ntBASIC17.78■□□□□ 0.44
RFC1P35251 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.78■□□□□ 0.44
RFC1P35251 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RFC1P35251 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RFC1P35251 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.78■□□□□ 0.44
RFC1P35251 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFC1P35251 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.77■□□□□ 0.44
RFC1P35251 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RFC1P35251 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFC1P35251 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms