Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.47■□□□□ 0.23
HOXA6P31267 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HOXA6P31267 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
HOXA6P31267 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HOXA6P31267 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.46■□□□□ 0.23
HOXA6P31267 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HOXA6P31267 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXA6P31267 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.46■□□□□ 0.23
HOXA6P31267 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HOXA6P31267 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXA6P31267 AP005482.1-201ENST00000563722 1273 ntBASIC16.46■□□□□ 0.23
HOXA6P31267 WASH4P-201ENST00000564273 1246 ntBASIC16.46■□□□□ 0.23
HOXA6P31267 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXA6P31267 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.46■□□□□ 0.23
HOXA6P31267 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.46■□□□□ 0.23
HOXA6P31267 AL033527.5-202ENST00000641632 1098 ntBASIC16.46■□□□□ 0.23
HOXA6P31267 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.46■□□□□ 0.23
HOXA6P31267 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXA6P31267 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXA6P31267 AC087289.5-201ENST00000586076 3175 ntBASIC16.46■□□□□ 0.22
HOXA6P31267 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HOXA6P31267 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.22
HOXA6P31267 TUBB8P12-201ENST00000308911 1335 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 TUBB7P-202ENST00000428444 1305 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 TUBB8P7-204ENST00000567960 1332 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXA6P31267 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXA6P31267 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXA6P31267 TTTY23B-201ENST00000442790 549 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.45■□□□□ 0.22
HOXA6P31267 AC024267.1-201ENST00000582320 895 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 AC026979.3-201ENST00000607315 403 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.45■□□□□ 0.22
HOXA6P31267 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HOXA6P31267 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.45■□□□□ 0.22
HOXA6P31267 TNXA-203ENST00000507684 2038 ntBASIC16.45■□□□□ 0.22
HOXA6P31267 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HOXA6P31267 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXA6P31267 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HOXA6P31267 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 BICD1-207ENST00000551848 1962 ntBASIC16.44■□□□□ 0.22
HOXA6P31267 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXA6P31267 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXA6P31267 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXA6P31267 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 AC092658.1-201ENST00000505836 891 ntBASIC16.44■□□□□ 0.22
HOXA6P31267 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HOXA6P31267 RRP7BP-205ENST00000566851 833 ntBASIC16.44■□□□□ 0.22
HOXA6P31267 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.44■□□□□ 0.22
HOXA6P31267 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXA6P31267 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXA6P31267 AL512343.1-201ENST00000605837 169 ntBASIC16.44■□□□□ 0.22
HOXA6P31267 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXA6P31267 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXA6P31267 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms