Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.37□□□□□ -0.11
BCL3P20749 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.37□□□□□ -0.11
BCL3P20749 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
BCL3P20749 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BCL3P20749 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BCL3P20749 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BCL3P20749 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
BCL3P20749 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BCL3P20749 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BCL3P20749 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.36□□□□□ -0.11
BCL3P20749 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.36□□□□□ -0.11
BCL3P20749 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.36□□□□□ -0.11
BCL3P20749 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.36□□□□□ -0.11
BCL3P20749 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BCL3P20749 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
BCL3P20749 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.36□□□□□ -0.11
BCL3P20749 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 REXO1L6P-202ENST00000619970 1078 ntBASIC14.36□□□□□ -0.11
BCL3P20749 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
BCL3P20749 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 LINC00895-201ENST00000629028 1637 ntBASIC14.36□□□□□ -0.11
BCL3P20749 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.36□□□□□ -0.11
BCL3P20749 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.36□□□□□ -0.11
BCL3P20749 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BCL3P20749 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
BCL3P20749 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BCL3P20749 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
BCL3P20749 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
BCL3P20749 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 AKR1C7P-201ENST00000305623 895 ntBASIC14.35□□□□□ -0.11
BCL3P20749 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
BCL3P20749 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BCL3P20749 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.35□□□□□ -0.11
BCL3P20749 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.35□□□□□ -0.11
BCL3P20749 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms