Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
HLA-DPA1P20036 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.03■□□□□ 0.32
HLA-DPA1P20036 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 MPDU1-223ENST00000582151 728 ntBASIC17.03■□□□□ 0.32
HLA-DPA1P20036 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 AC010654.1-201ENST00000615722 808 ntBASIC17.03■□□□□ 0.32
HLA-DPA1P20036 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DPA1P20036 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 PRSS29P-201ENST00000440800 595 ntBASIC17.02■□□□□ 0.32
HLA-DPA1P20036 AC108751.1-201ENST00000490852 363 ntBASIC17.02■□□□□ 0.32
HLA-DPA1P20036 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 AC005412.3-201ENST00000580309 715 ntBASIC17.02■□□□□ 0.32
HLA-DPA1P20036 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 AC004790.2-201ENST00000623588 572 ntBASIC17.02■□□□□ 0.32
HLA-DPA1P20036 AL139011.1-202ENST00000642063 584 ntBASIC17.02■□□□□ 0.32
HLA-DPA1P20036 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DPA1P20036 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DPA1P20036 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 AL353732.1-201ENST00000569618 1459 ntBASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 FLJ38576-201ENST00000623820 2459 ntBASIC17.01■□□□□ 0.31
HLA-DPA1P20036 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DPA1P20036 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms