Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM21P19474 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM21P19474 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM21P19474 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM21P19474 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 AL356309.3-201ENST00000624132 1934 ntBASIC18.66■□□□□ 0.58
TRIM21P19474 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM21P19474 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM21P19474 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.66■□□□□ 0.58
TRIM21P19474 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM21P19474 PCDHB17P-201ENST00000539533 2393 ntBASIC18.66■□□□□ 0.58
TRIM21P19474 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM21P19474 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM21P19474 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRIM21P19474 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM21P19474 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 SIGLEC30P-201ENST00000455569 941 ntBASIC18.65■□□□□ 0.58
TRIM21P19474 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM21P19474 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 AP001269.4-201ENST00000609611 512 ntBASIC18.65■□□□□ 0.58
TRIM21P19474 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM21P19474 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRIM21P19474 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM21P19474 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM21P19474 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM21P19474 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM21P19474 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM21P19474 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM21P19474 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM21P19474 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM21P19474 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM21P19474 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM21P19474 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM21P19474 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM21P19474 AC073648.2-201ENST00000510116 352 ntBASIC18.64■□□□□ 0.57
TRIM21P19474 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM21P19474 AL121912.1-201ENST00000603683 238 ntBASIC18.64■□□□□ 0.57
TRIM21P19474 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRIM21P19474 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM21P19474 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM21P19474 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM21P19474 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM21P19474 PKD1P5-201ENST00000532415 10291 ntBASIC18.64■□□□□ 0.57
TRIM21P19474 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM21P19474 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM21P19474 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM21P19474 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM21P19474 AL662844.4-201ENST00000606367 2838 ntBASIC18.64■□□□□ 0.57
TRIM21P19474 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM21P19474 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms