Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NCLP19338 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.17■□□□□ 0.82
NCLP19338 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.17■□□□□ 0.82
NCLP19338 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.17■□□□□ 0.82
NCLP19338 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.17■□□□□ 0.82
NCLP19338 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NCLP19338 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCLP19338 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.16■□□□□ 0.82
NCLP19338 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 AC067930.6-201ENST00000623257 4947 ntBASIC20.16■□□□□ 0.82
NCLP19338 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.16■□□□□ 0.82
NCLP19338 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NCLP19338 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NCLP19338 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.16■□□□□ 0.82
NCLP19338 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.16■□□□□ 0.82
NCLP19338 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.16■□□□□ 0.82
NCLP19338 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.16■□□□□ 0.82
NCLP19338 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NCLP19338 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.16■□□□□ 0.82
NCLP19338 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
NCLP19338 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.16■□□□□ 0.82
NCLP19338 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCLP19338 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NCLP19338 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NCLP19338 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 AL121672.3-201ENST00000608644 468 ntBASIC20.15■□□□□ 0.82
NCLP19338 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.15■□□□□ 0.82
NCLP19338 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.15■□□□□ 0.82
NCLP19338 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NCLP19338 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 AC010460.3-201ENST00000511359 1579 ntBASIC20.15■□□□□ 0.82
NCLP19338 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.15■□□□□ 0.82
NCLP19338 AC092068.3-201ENST00000587894 2016 ntBASIC20.15■□□□□ 0.82
NCLP19338 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NCLP19338 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NCLP19338 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCLP19338 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCLP19338 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
NCLP19338 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
NCLP19338 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.14■□□□□ 0.82
NCLP19338 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.14■□□□□ 0.82
NCLP19338 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLP19338 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLP19338 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLP19338 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLP19338 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCLP19338 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCLP19338 AC016734.2-201ENST00000624325 1377 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms