Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC108073.2-201ENST00000464002 357 ntBASIC17.71■□□□□ 0.43
PDGFRAP16234 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFRAP16234 AC034105.1-201ENST00000563488 319 ntBASIC17.71■□□□□ 0.43
PDGFRAP16234 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFRAP16234 AC004790.2-201ENST00000623588 572 ntBASIC17.71■□□□□ 0.43
PDGFRAP16234 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 LINC00895-201ENST00000629028 1637 ntBASIC17.71■□□□□ 0.43
PDGFRAP16234 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDGFRAP16234 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFRAP16234 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 CROCCP1-201ENST00000426910 5675 ntBASIC17.71■□□□□ 0.43
PDGFRAP16234 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFRAP16234 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFRAP16234 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFRAP16234 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDGFRAP16234 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 AL603756.1-201ENST00000606511 2163 ntBASIC17.7■□□□□ 0.42
PDGFRAP16234 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.7■□□□□ 0.42
PDGFRAP16234 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 MRPL20P1-201ENST00000400819 433 ntBASIC17.7■□□□□ 0.42
PDGFRAP16234 MIR940-201ENST00000401276 94 ntBASIC17.7■□□□□ 0.42
PDGFRAP16234 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.7■□□□□ 0.42
PDGFRAP16234 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.7■□□□□ 0.42
PDGFRAP16234 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PDGFRAP16234 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.7■□□□□ 0.42
PDGFRAP16234 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFRAP16234 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFRAP16234 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFRAP16234 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDGFRAP16234 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFRAP16234 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.7■□□□□ 0.42
PDGFRAP16234 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.7■□□□□ 0.42
PDGFRAP16234 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PDGFRAP16234 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 AC129492.6-201ENST00000611383 1305 ntBASIC17.7■□□□□ 0.42
PDGFRAP16234 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDGFRAP16234 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFRAP16234 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFRAP16234 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFRAP16234 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDGFRAP16234 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 AC009947.1-201ENST00000444350 727 ntBASIC17.69■□□□□ 0.42
PDGFRAP16234 AC108751.1-201ENST00000490852 363 ntBASIC17.69■□□□□ 0.42
PDGFRAP16234 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 AC107918.2-201ENST00000530817 355 ntBASIC17.69■□□□□ 0.42
PDGFRAP16234 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.69■□□□□ 0.42
PDGFRAP16234 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 AC092171.3-201ENST00000610122 2651 ntBASIC17.69■□□□□ 0.42
PDGFRAP16234 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 PCDHA14-201ENST00000506751 2298 ntBASIC17.69■□□□□ 0.42
PDGFRAP16234 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDGFRAP16234 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.69■□□□□ 0.42
PDGFRAP16234 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PDGFRAP16234 AC006277.1-201ENST00000624348 1610 ntBASIC17.69■□□□□ 0.42
PDGFRAP16234 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.69■□□□□ 0.42
PDGFRAP16234 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms