Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHAP12694 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHAP12694 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHAP12694 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.14■□□□□ 0.17
BCKDHAP12694 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BCKDHAP12694 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHAP12694 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 ME2P1-201ENST00000426028 1970 ntBASIC16.13■□□□□ 0.17
BCKDHAP12694 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHAP12694 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHAP12694 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.13■□□□□ 0.17
BCKDHAP12694 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHAP12694 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BCKDHAP12694 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.13■□□□□ 0.17
BCKDHAP12694 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHAP12694 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 AC008741.2-201ENST00000612792 3115 ntBASIC16.13■□□□□ 0.17
BCKDHAP12694 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.13■□□□□ 0.17
BCKDHAP12694 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.13■□□□□ 0.17
BCKDHAP12694 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHAP12694 AL513523.2-202ENST00000427283 2040 ntBASIC16.12■□□□□ 0.17
BCKDHAP12694 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.12■□□□□ 0.17
BCKDHAP12694 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 MIR1224-201ENST00000408193 85 ntBASIC16.12■□□□□ 0.17
BCKDHAP12694 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.12■□□□□ 0.17
BCKDHAP12694 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.12■□□□□ 0.17
BCKDHAP12694 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.12■□□□□ 0.17
BCKDHAP12694 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.12■□□□□ 0.17
BCKDHAP12694 AL355877.3-201ENST00000622820 899 ntBASIC16.12■□□□□ 0.17
BCKDHAP12694 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.12■□□□□ 0.17
BCKDHAP12694 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BCKDHAP12694 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 AC005052.1-201ENST00000625181 2492 ntBASIC16.12■□□□□ 0.17
BCKDHAP12694 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.12■□□□□ 0.17
BCKDHAP12694 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BCKDHAP12694 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
BCKDHAP12694 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 TOP3BP1-201ENST00000420768 1380 ntBASIC16.12■□□□□ 0.17
BCKDHAP12694 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHAP12694 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.11■□□□□ 0.17
BCKDHAP12694 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHAP12694 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHAP12694 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHAP12694 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.11■□□□□ 0.17
BCKDHAP12694 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
BCKDHAP12694 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
BCKDHAP12694 PCDHA1-201ENST00000378133 2726 ntBASIC16.11■□□□□ 0.17
BCKDHAP12694 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BCKDHAP12694 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHAP12694 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHAP12694 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
BCKDHAP12694 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHAP12694 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.11■□□□□ 0.17
BCKDHAP12694 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHAP12694 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms