Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV4-38-2P0DP08 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV4-38-2P0DP08 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
IGHV4-38-2P0DP08 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV4-38-2P0DP08 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV4-38-2P0DP08 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC092068.3-201ENST00000587894 2016 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC069262.1-201ENST00000539058 672 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC124947.2-201ENST00000547118 1133 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC026150.2-201ENST00000564693 1156 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC015911.4-201ENST00000588022 1070 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC008267.7-201ENST00000624570 1194 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 TUBB3P1-201ENST00000405796 1332 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 AC141586.5-201ENST00000624546 2050 ntBASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IGHV4-38-2P0DP08 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 SPDYE14P-201ENST00000442619 822 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 BCRP1-201ENST00000444246 691 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AL512356.2-201ENST00000546955 174 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AL138918.1-201ENST00000568306 659 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AP000842.3-202ENST00000569238 1080 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AL390955.2-201ENST00000603032 514 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 AC106820.2-201ENST00000563775 3264 ntBASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-38-2P0DP08 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms