Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP2P08253 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP2P08253 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MMP2P08253 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.93■□□□□ 0.3
MMP2P08253 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MMP2P08253 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP2P08253 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 AL591424.1-201ENST00000442569 1213 ntBASIC16.93■□□□□ 0.3
MMP2P08253 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MMP2P08253 KRT18P3-201ENST00000451602 1288 ntBASIC16.93■□□□□ 0.3
MMP2P08253 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.93■□□□□ 0.3
MMP2P08253 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP2P08253 KRT19P2-202ENST00000557173 1012 ntBASIC16.93■□□□□ 0.3
MMP2P08253 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MMP2P08253 AL031432.2-201ENST00000566714 459 ntBASIC16.93■□□□□ 0.3
MMP2P08253 AL928711.1-201ENST00000570165 459 ntBASIC16.93■□□□□ 0.3
MMP2P08253 AC023141.13-201ENST00000604991 943 ntBASIC16.93■□□□□ 0.3
MMP2P08253 AP001350.2-201ENST00000625104 1094 ntBASIC16.93■□□□□ 0.3
MMP2P08253 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 AC025580.3-201ENST00000617932 1424 ntBASIC16.93■□□□□ 0.3
MMP2P08253 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP2P08253 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP2P08253 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MMP2P08253 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 AL031731.1-201ENST00000642131 2094 ntBASIC16.92■□□□□ 0.3
MMP2P08253 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MMP2P08253 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MMP2P08253 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.92■□□□□ 0.3
MMP2P08253 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.92■□□□□ 0.3
MMP2P08253 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
MMP2P08253 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.92■□□□□ 0.3
MMP2P08253 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
MMP2P08253 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP2P08253 AL513190.1-201ENST00000621254 727 ntBASIC16.92■□□□□ 0.3
MMP2P08253 AC092865.6-201ENST00000642101 219 ntBASIC16.92■□□□□ 0.3
MMP2P08253 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
MMP2P08253 GGT4P-201ENST00000623672 1708 ntBASIC16.92■□□□□ 0.3
MMP2P08253 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MMP2P08253 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 BCAR1-209ENST00000546196 1340 ntBASIC16.92■□□□□ 0.3
MMP2P08253 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MMP2P08253 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP2P08253 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP2P08253 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
MMP2P08253 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms