Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.22□□□□□ -0.13
CD74P04233 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.22□□□□□ -0.13
CD74P04233 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CD74P04233 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.22□□□□□ -0.13
CD74P04233 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.22□□□□□ -0.13
CD74P04233 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.22□□□□□ -0.13
CD74P04233 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 AC092597.1-201ENST00000487352 616 ntBASIC14.22□□□□□ -0.13
CD74P04233 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.22□□□□□ -0.13
CD74P04233 AC093827.2-201ENST00000512654 315 ntBASIC14.22□□□□□ -0.13
CD74P04233 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.22□□□□□ -0.13
CD74P04233 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CD74P04233 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 AC140113.3-201ENST00000605663 199 ntBASIC14.22□□□□□ -0.13
CD74P04233 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CD74P04233 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.22□□□□□ -0.13
CD74P04233 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD74P04233 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.22□□□□□ -0.13
CD74P04233 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 AC132938.5-201ENST00000624980 1813 ntBASIC14.22□□□□□ -0.13
CD74P04233 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.22□□□□□ -0.13
CD74P04233 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD74P04233 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.22□□□□□ -0.13
CD74P04233 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.22□□□□□ -0.13
CD74P04233 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.21□□□□□ -0.13
CD74P04233 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.21□□□□□ -0.13
CD74P04233 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 KRT17P2-201ENST00000300992 1314 ntBASIC14.21□□□□□ -0.13
CD74P04233 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CD74P04233 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.21□□□□□ -0.13
CD74P04233 AC006058.4-201ENST00000624016 1670 ntBASIC14.21□□□□□ -0.13
CD74P04233 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.21□□□□□ -0.13
CD74P04233 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.21□□□□□ -0.13
CD74P04233 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CD74P04233 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.21□□□□□ -0.13
CD74P04233 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.21□□□□□ -0.13
CD74P04233 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.21□□□□□ -0.13
CD74P04233 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.21□□□□□ -0.13
CD74P04233 AL031432.5-201ENST00000641059 760 ntBASIC14.21□□□□□ -0.13
CD74P04233 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 AC006277.1-201ENST00000624348 1610 ntBASIC14.21□□□□□ -0.13
CD74P04233 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.21□□□□□ -0.13
CD74P04233 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CD74P04233 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD74P04233 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CD74P04233 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.21□□□□□ -0.14
CD74P04233 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.21□□□□□ -0.14
CD74P04233 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD74P04233 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.21□□□□□ -0.14
CD74P04233 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD74P04233 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD74P04233 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CD74P04233 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CD74P04233 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD74P04233 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD74P04233 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD74P04233 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms