Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 LINC01568-207ENST00000641790 1380 ntBASIC12.74□□□□□ -0.37
LTAP01374 KRT18P22-201ENST00000402024 1347 ntBASIC12.74□□□□□ -0.37
LTAP01374 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LTAP01374 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 AL359075.1-203ENST00000462729 1002 ntBASIC12.74□□□□□ -0.37
LTAP01374 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
LTAP01374 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.74□□□□□ -0.37
LTAP01374 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.74□□□□□ -0.37
LTAP01374 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LTAP01374 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LTAP01374 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 Z83836.1-201ENST00000624605 1642 ntBASIC12.73□□□□□ -0.37
LTAP01374 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.73□□□□□ -0.37
LTAP01374 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.73□□□□□ -0.37
LTAP01374 KLF4P1-201ENST00000412782 1185 ntBASIC12.73□□□□□ -0.37
LTAP01374 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.73□□□□□ -0.37
LTAP01374 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.73□□□□□ -0.37
LTAP01374 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.73□□□□□ -0.37
LTAP01374 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.73□□□□□ -0.37
LTAP01374 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LTAP01374 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms