Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.87■□□□□ 0.61
GGPS1O95749 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
GGPS1O95749 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.87■□□□□ 0.61
GGPS1O95749 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 PMS2P4-201ENST00000412466 1052 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.87■□□□□ 0.61
GGPS1O95749 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GGPS1O95749 FAM86GP-201ENST00000448322 971 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.87■□□□□ 0.61
GGPS1O95749 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.87■□□□□ 0.61
GGPS1O95749 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GGPS1O95749 MIR3909-201ENST00000579518 119 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 UXT-AS1-201ENST00000590504 1525 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.87■□□□□ 0.61
GGPS1O95749 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 AC141586.5-201ENST00000624546 2050 ntBASIC18.87■□□□□ 0.61
GGPS1O95749 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.87■□□□□ 0.61
GGPS1O95749 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GGPS1O95749 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 PP12613-201ENST00000424958 2230 ntBASIC18.86■□□□□ 0.61
GGPS1O95749 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.86■□□□□ 0.61
GGPS1O95749 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GGPS1O95749 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.86■□□□□ 0.61
GGPS1O95749 GPS2P2-201ENST00000430745 888 ntBASIC18.86■□□□□ 0.61
GGPS1O95749 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.86■□□□□ 0.61
GGPS1O95749 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.86■□□□□ 0.61
GGPS1O95749 MIR4492-201ENST00000581627 80 ntBASIC18.86■□□□□ 0.61
GGPS1O95749 LINC02084-201ENST00000606069 1096 ntBASIC18.86■□□□□ 0.61
GGPS1O95749 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GGPS1O95749 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GGPS1O95749 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 AC092053.1-201ENST00000605787 1936 ntBASIC18.86■□□□□ 0.61
GGPS1O95749 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GGPS1O95749 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
GGPS1O95749 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.85■□□□□ 0.61
GGPS1O95749 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
GGPS1O95749 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GGPS1O95749 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.85■□□□□ 0.61
GGPS1O95749 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GGPS1O95749 RBPMS2P1-201ENST00000437762 623 ntBASIC18.85■□□□□ 0.61
GGPS1O95749 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.85■□□□□ 0.61
GGPS1O95749 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.85■□□□□ 0.61
GGPS1O95749 KRT8P23-201ENST00000560090 1207 ntBASIC18.85■□□□□ 0.61
GGPS1O95749 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.85■□□□□ 0.61
GGPS1O95749 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.85■□□□□ 0.61
GGPS1O95749 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GGPS1O95749 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms