Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.02■□□□□ -0
CNOT4O95628 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNOT4O95628 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.02□□□□□ -0.01
CNOT4O95628 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.02□□□□□ -0.01
CNOT4O95628 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
CNOT4O95628 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CNOT4O95628 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.01□□□□□ -0.01
CNOT4O95628 FAM185BP-201ENST00000443595 716 ntBASIC15.01□□□□□ -0.01
CNOT4O95628 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.01□□□□□ -0.01
CNOT4O95628 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.01□□□□□ -0.01
CNOT4O95628 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 MTDHP5-201ENST00000598980 586 ntBASIC15.01□□□□□ -0.01
CNOT4O95628 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.01□□□□□ -0.01
CNOT4O95628 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CNOT4O95628 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.01□□□□□ -0.01
CNOT4O95628 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.01□□□□□ -0.01
CNOT4O95628 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNOT4O95628 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 AC023274.1-201ENST00000418278 595 ntBASIC15□□□□□ -0.01
CNOT4O95628 DNAJB3-202ENST00000449667 1266 ntBASIC15□□□□□ -0.01
CNOT4O95628 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15□□□□□ -0.01
CNOT4O95628 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15□□□□□ -0.01
CNOT4O95628 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CNOT4O95628 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15□□□□□ -0.01
CNOT4O95628 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
CNOT4O95628 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CNOT4O95628 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15□□□□□ -0.01
CNOT4O95628 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms