Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
KDM4BO94953 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 RCN1P1-201ENST00000400413 996 ntBASIC14.91□□□□□ -0.02
KDM4BO94953 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
KDM4BO94953 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.91□□□□□ -0.02
KDM4BO94953 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.91□□□□□ -0.02
KDM4BO94953 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.91□□□□□ -0.02
KDM4BO94953 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.91□□□□□ -0.02
KDM4BO94953 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
KDM4BO94953 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 RN7SL850P-201ENST00000579959 291 ntBASIC14.91□□□□□ -0.02
KDM4BO94953 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.91□□□□□ -0.02
KDM4BO94953 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
KDM4BO94953 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.91□□□□□ -0.02
KDM4BO94953 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
KDM4BO94953 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.91□□□□□ -0.02
KDM4BO94953 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
KDM4BO94953 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
KDM4BO94953 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KDM4BO94953 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
KDM4BO94953 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 MIR600HG-201ENST00000449175 5984 ntBASIC14.9□□□□□ -0.02
KDM4BO94953 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.9□□□□□ -0.02
KDM4BO94953 TSPY22P-201ENST00000427496 604 ntBASIC14.9□□□□□ -0.02
KDM4BO94953 RN7SL606P-201ENST00000472779 293 ntBASIC14.9□□□□□ -0.02
KDM4BO94953 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.9□□□□□ -0.02
KDM4BO94953 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
KDM4BO94953 AL353801.3-201ENST00000609898 542 ntBASIC14.9□□□□□ -0.02
KDM4BO94953 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
KDM4BO94953 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.9□□□□□ -0.02
KDM4BO94953 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.9□□□□□ -0.02
KDM4BO94953 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KDM4BO94953 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.89□□□□□ -0.03
KDM4BO94953 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
KDM4BO94953 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
KDM4BO94953 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.89□□□□□ -0.03
KDM4BO94953 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
KDM4BO94953 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
KDM4BO94953 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
KDM4BO94953 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KDM4BO94953 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.89□□□□□ -0.03
KDM4BO94953 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
KDM4BO94953 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms